Molecular movie filmstrip.
SLAC science explained

XFELs: Spying on atoms and molecules

X-ray free-electron lasers are like X-ray microscopes, allowing scientists to spot the intricate movements of atoms and molecules and capture their motion in snapshots that can be strung together into “molecular movies.”

By Ali Sundermier

What is an X-ray free-electron laser?

XFELs produce powerful X-ray pulses that reveal the intricate movements of atoms and molecules. Scientists capture these motions in snapshots that can be strung together into “molecular movies” of materials, chemistry and biology in action. 

These facilities produce pulses as short as millionths of a billionth of a second and about 100 times more intense than all the sunlight hitting the Earth’s surface focused onto a thumbnail. That’s more than enough to destroy most samples. Fortunately, the pulses are also like nimble cat burglars that snatch all the information scientists need from the delicate samples in the instant before they’re blown apart. XFELs also allow scientists to watch atomic and molecular processes play out in conditions very similar to the environments where they naturally take place.

At XFELs, scientists have uncovered the 3D molecular structure of proteins involved in transmitting disease, developed next-generation drug therapies, taken the first live snapshots of fleeting steps in photosynthesis that generate the oxygen we breathe and studied the microscopic components of air pollution. They can measure stress, strain and failure in advanced aerospace materials and study how matter behaves under the extreme pressures that drive the formation of planets.

video still frame from explainer about X-ray Free Electron Lasers.
Video
Play this video for a simple explanation of what an XFEL is and what kind of research scientists can do with this engineering marvel. (Olivier Bonin/SLAC National Accelerator Laboratory)

How do they work?

At SLAC’s XFEL the Linac Coherent Light Source (LCLS), a drive laser generates a pulse of ultraviolet light, which travels to an injector "gun" and strikes the surface of a copper plate. The plate releases a burst of electrons, which are accelerated by a series of devices to boost their energy. These pulses then enter the undulator hall, where thousands of intricately arranged magnets wiggle the electron bunches back and forth, forcing them to generate X-rays. As each electron bunch travels with its associated X-rays, they start to interact with each other, causing the waves of X-ray light to synchronize, like a choir singing, and create “coherent” or laser light. The electrons are safely discarded, and the X-ray laser pulses continue in a straight line to LCLS experiments, arriving at a rate of up to 120 pulses per second.

Diagram of the next-generation XFEL at SLAC.
In this diagram of the next-generation XFEL at SLAC, electron pulses originating from the gun are accelerated through a series of cryomodules before entering the undulator hall, where magnets wiggle them back and forth, forcing them to generate X-rays. The bunches start to interact with each other, causing the waves of X-ray light to synchronize and create “coherent” or laser light. The electrons are safely discarded, and the X-ray laser pulses continue in a straight line to experiments.

What’s special about LCLS?

LCLS was the world’s first light source of its kind, a free-electron laser producing “hard,” or very high-energy, X-rays. It is a full-service user facility, available free of charge to researchers from around the world. More than 3,000 researchers have conducted experiments at LCLS since it turned on in April 2009. Today, four more hard X-ray FELs are in operation around the world, with more coming online in the next few years.

 LCLS has nine experimental instruments and approximately 100 full-time scientists who specialize in techniques for imaging samples, determining their atomic structures and analyzing their chemistry. SLAC is also home to other facilities where scientists can run complementary experiments with X-rays or electron beams.

LCLS’s two undulators produce hard and soft X-rays, and it is the only facility where scientists can shine both types of X-rays on a sample at once. Hard X-rays, which are more energetic, are used to image materials and biological systems at the atomic level. Soft X-rays capture how energy flows between atoms and molecules, allowing researchers to track chemistry in action and gain insights into new energy technologies.

An upgrade to LCLS is now underway. When it’s complete, LCLS will have two linear accelerators – the existing copper linac and a new superconducting one – to feed electrons into the undulators and produce X-ray laser pulses. The beam will fire 8,000 times faster than the original, producing up to a million pulses per second and enabling an entirely new generation of experiments in materials, physical, chemical and biological sciences.

LCLS is a DOE Office of Science user facility.

 

 

Next-generation computers and the power grid.

How we use XFELs

 

Next-generation computers and the power grid

LCLS studies are helping to home in on the most promising materials and methods for transforming the electric power grid and driving next-generation computer components beyond classical limits.

LCLS X-ray pulses are so fast that they allow us to observe and analyze previously unseen steps in chemical reactions.

Better, cleaner fuels and chemicals

LCLS X-ray pulses are so fast that they allow us to observe and analyze previously unseen steps in chemical reactions, helping scientists design more efficient reactions to produce fuels, fertilizers and industrial chemicals.

LCLS makes it possible to determine the 3-D atomic structure of important receptor proteins that had been out of reach.

More effective medication with fewer side effects

With its ability to study very tiny crystals under natural conditions, LCLS makes it possible to determine the 3D atomic structure of important receptor proteins that had been out of reach. A better understanding of how certain drugs dock to these proteins could lead to more effective drugs with fewer side effects.

LCLS allows us to study how plants use energy from sunlight to release oxygen into the air we breathe during a process called photosynthesis.

Renewable energy that mimics nature

LCLS allows us to study how plants use energy from sunlight to release oxygen into the air we breathe during a process called photosynthesis. Scientists are also using the tool to study how light affects other living things. 

High-power laser systems at SLAC heat matter to millions of degrees and crush it with billions of tons of pressure per square inch.

Fusion reactions and seeing inside planets

High-power laser systems at SLAC heat matter to millions of degrees and crush it with billions of tons of pressure per square inch. Scientists use LCLS to measure what happens to matter under these extreme conditions with high precision at very small scales and over very short periods of time.

Image gallery

XFEL science at LCLS

Person working with instruments in an experimental hutch, surrounded by equipment.
New and improved instruments in the RIXS experimental hutch will allow researchers to take advantage of the higher repetition rate of the upgraded LCLS-II for studies of chemistry and quantum phenomena. (Jacqueline Ramseyer Orrell/SLAC National Accelerator Laboratory)
A look inside SLAC’s FACET-II test facility
Accelerator physicists examine a laser system that was key to creating the world's first petawatt electron beam. Read more about this advance in our news article. (Jacqueline Ramseyer Orrell/SLAC National Accelerator Laboratory)
A person in the Linac Coherent Light Source (LCLS) Undulator Hall.
Electrons accelerated by SLAC’s linear accelerator enter the LCLS Undulator Hall and run a gauntlet of 32 powerful undulators. Each undulator contains 224 magnets whose alternating poles force the electrons to zigzag violently and radiate X-rays. By the time they leave the undulator hall, the X-ray laser pulses are a billion times brighter than beams from traditional synchrotron X-ray sources, opening a new realm of possible experiments and discoveries. (Alberto Gamazo/SLAC National Accelerator Laboratory)
Person pointing at a monitor inside the time-resolved atomic, molecular and optical science (TMO) hutch.
The Time-resolved Atomic, Molecular and Optical Science (TMO) instrument is one of three new LCLS-II instruments with a energy range from 0.25 to 2 keV. (Jacqueline Ramseyer Orrell/SLAC National Accelerator Laboratory)
Vincent Esposito and Sam Soon. MFX Hutch 4.5 and control room.
By using short X-ray pulses to limit damage to samples, the MFX (Macromolecular Femtosecond Crystallography) instrument allows researchers to study metal-containing macromolecules and other things that are especially sensitive to radiation. (Jacqueline Ramseyer Orrell/SLAC National Accelerator Laboratory)
Cryoplant building alongside the linac at sunrise
The LCLS-II Cryoplant (center) purifies and chills liquid helium to minus 456 degrees Fahrenheit and pumps it through pipes to cryomodules below ground, where it cools the superconducting accelerator to an operating temperature of 4.5 kelvins. (Olivier Bonin/SLAC National Accelerator Laboratory)

For questions or comments, contact the SLAC Office of Communications at communications@slac.stanford.edu.

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